From MultiSeq, export sequences in FASTA format ( : All Sequences, Sequence Data (FASTA), Include sources in FASTA header).
Create a multiple sequence alignment(MSA) with MAFFT (or ClustaLW or tCOFFE or Muscle). Here we use the MAFFT server:
Upload to the MAFFT server (use defaults).
adk_msa_mafft.aln
(Clustal MSA format) and
adk_msa_mafft.fasta
(FASTA))Then use your saved alignment to create a WebLogo (check Multiline Logo). Download as PDF or PNG.