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Tutorial: Simulating AdK with Gromacs
A tutorial that teaches you to perform and analyze a molecular dynamics simulation of the the enzyme adenylate kinase (AdK) with the Gromacs simulation package.
Introduction to the command line
As a computational scientist you have one primary tool at your hand: a computer. In order to get most out of it you have to communicate with it via text commands, entered on the command line. This article points to some resources that should help you to learn how to do this.